PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02676
Common NameKK1_002741
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 252aa    MW: 28006.1 Da    PI: 8.2181
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02676genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.1e-1266112354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  +++ +k+L
  C.cajan_02676  66 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVIDQVKDL 112
                    79*************************8.....7***********9999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.04663112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-1266115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-1466115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.00E-966115No hitNo description
PfamPF000102.4E-1066112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-1069118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00158159194No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MENYYDSGWH MGTSWPQCSD HSSSFAIPAQ ILPHVSDSAS LQFGEFHSWP LPLEGVAEER  60
AISASKSHSQ AEKRRRDRIN AQLATLRKLI PKSDKMDKAA LLGSVIDQVK DLKRKAMDVS  120
RAFTVPTEID EVSIDYDHVQ DESCTKVSKL KENMVIKASV CCDDRPELFP ELIQVLKGLR  180
LTAVKAEIAS VGGRIKSILV LCSKDNEEGV CLTTLKQSLK SAVTKIASSN MASNCPTRSK  240
RQRFFLPSHC LE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02676
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0894760.0BT089476.1 Soybean clone JCVI-FLGm-2E23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020228279.10.0transcription factor bHLH51
TrEMBLA0A151SNT50.0A0A151SNT5_CAJCA; Transcription factor bHLH51
STRINGXP_007163561.11e-175(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57963351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.16e-51bHLH family protein