PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02946
Common NameKK1_003015
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 277aa    MW: 31296 Da    PI: 5.8872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02946genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11112157555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    h + Er+RR+++  +f  L   +P +     kK++Ka +L++A++Y+k+Lq
  C.cajan_02946 112 HLMSERNRRQELTRKFIALAATIPGL-----KKMDKAHVLREAINYVKQLQ 157
                    7789**********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.513107156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-15112169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-9112160No hitNo description
PfamPF000103.6E-9112157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.85E-16112169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-12113162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MDDHEVNECL CHANPFDEEF LREILPQPQE ALVTTPTSSQ YAEDHKPITS SATTYILSFE  60
KSAALLPADP DSCSAWKENS QSQLLKEILP LPSSRVNQGT KKTRSASESL DHLMSERNRR  120
QELTRKFIAL AATIPGLKKM DKAHVLREAI NYVKQLQERV DELEEDIQKN DVESAITITK  180
SHLCVDDKCN DLALVEVEAR VLGKEVLIKI HCAKQKGVLL KIMSQLERLH LYISTSNVLP  240
FGNTLDITII AQMGEKYKLV MKDLVKELRQ VAMNEAM
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02946
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0937077e-87BT093707.1 Soybean clone JCVI-FLGm-14A22 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227684.10.0transcription factor bHLH25
SwissprotQ9T0723e-48BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A151SPS80.0A0A151SPS8_CAJCA; Transcription factor bHLH25
STRINGGLYMA15G00750.21e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15398711
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-50bHLH family protein