PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03454
Common NameKK1_003533
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 263aa    MW: 29361 Da    PI: 9.8889
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03454genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-1958108255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+++AeIrdp++ng  +r++lg++ t+eeAa a+++a+ k++g
  C.cajan_03454  58 RYRGVRRRP-WGKFAAEIRDPKKNG--ARIWLGTYVTEEEAALAYDKAAFKMRG 108
                    7********.***********9998..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.6E-3858122IPR001471AP2/ERF domain
SuperFamilySSF541715.56E-2358117IPR016177DNA-binding domain
PROSITE profilePS5103224.558116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-3258117IPR001471AP2/ERF domain
PfamPF008474.8E-1458108IPR001471AP2/ERF domain
PRINTSPR003672.4E-135970IPR001471AP2/ERF domain
CDDcd000184.87E-2566118No hitNo description
PRINTSPR003672.4E-1398118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MSSTTTASEC SYLDQIQQYL LPNDSGILTP NQAFPSPRHN TGSDTAVREA NAPPKWRRYR  60
GVRRRPWGKF AAEIRDPKKN GARIWLGTYV TEEEAALAYD KAAFKMRGRK AKLNFPHLIG  120
SDDTSSKVPS VVASKWSLPE PSSPSSLDDS CESQGSKRRK SLVNLLNNLA KDRSRHFIGF  180
DDTSSKSLSV VTSKQSLSKP SSLSSLDDSC ESQWSKRRKS SVNLLNNLAK DRSQVKVVEM  240
ALETNEVEKW VNELSDCTLI WCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2855123270ATERF1
3gcc_A4e-2855123270ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03454
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1431722e-59BT143172.1 Medicago truncatula clone JCVI-FLMt-5M13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029129511.10.0ethylene-responsive transcription factor ERF113
TrEMBLA0A151SR140.0A0A151SR14_CAJCA; Ethylene-responsive transcription factor 2
STRINGGLYMA18G48741.13e-71(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-30ethylene-responsive element binding factor 13