PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03714
Common NameKK1_003795
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 223aa    MW: 25552.2 Da    PI: 7.6271
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03714genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.5e-125497755
                   HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     Er+RR+++ +++  Lr ++P+ +      Kl+Ka+i + A+eYI++L+
  C.cajan_03714 54 VSERNRRKKLDERLYALRAVVPNiS------KLDKASIIKDAIEYIHHLH 97
                   57*********************66......*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-1647113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.5164796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.95E-1351101No hitNo description
Gene3DG3DSA:4.10.280.103.7E-1553113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-1353102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-95496IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MENFGEEYKN YWENMFFPSE DLDGWAMDHE GFSGYYDSSS PDGGASSAAA KNIVSERNRR  60
KKLDERLYAL RAVVPNISKL DKASIIKDAI EYIHHLHEEE KRIQAEILDL QSQNLKNPTY  120
DFQQYLPILL RSKKTRTQHL LHSSTSPIQL IGLKVTHMAE KTFVVSLTCN KRTDTMVKLC  180
EVFESLKLKV ITANISSFSG TLLKTVFIQV SLPFCPSSMF IYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A9e-14531131070Transcription factor MYC2
5gnj_B9e-14531131070Transcription factor MYC2
5gnj_E9e-14531131070Transcription factor MYC2
5gnj_F9e-14531131070Transcription factor MYC2
5gnj_G9e-14531131070Transcription factor MYC2
5gnj_I9e-14531131070Transcription factor MYC2
5gnj_M9e-14531131070Transcription factor MYC2
5gnj_N9e-14531131070Transcription factor MYC2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03714
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225715.11e-156transcription factor bHLH35
SwissprotQ2HIV97e-74BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A151SRT21e-166A0A151SRT2_CAJCA; Transcription factor bHLH35
STRINGXP_007154705.11e-110(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33893369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.28e-64bHLH family protein