PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03812
Common NameKK1_003893
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 400aa    MW: 44226.7 Da    PI: 9.4639
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03812genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.5e-29174232259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dg++WrKYGqK  k +++pr+YYrCt+a gCpv+k+v+r+ ed +v+++tYeg+Hnh+
  C.cajan_03812 174 SDGCQWRKYGQKIAKANPCPRAYYRCTMAvGCPVRKQVQRCMEDMTVLITTYEGNHNHP 232
                    7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-32158234IPR003657WRKY domain
SuperFamilySSF1182908.37E-27166234IPR003657WRKY domain
PROSITE profilePS5081129.252168234IPR003657WRKY domain
SMARTSM007742.1E-34173233IPR003657WRKY domain
PfamPF031061.2E-25175232IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
STLRTEVSIL KEENCQLRTM LDQITRNYHQ LQLFAAMQKQ KPHQVASSIY MLTRTRLYVN  60
FSFIKLYISM INLIKITHMK YLKNRNMPFY FYDEHAIFFN LFPQQFAELL NDCGKRNIGK  120
QARPDPVEDV PEQSSSQSWG SSKNLKFEES KPSEHPFKKP RVSVRARSEA PLISDGCQWR  180
KYGQKIAKAN PCPRAYYRCT MAVGCPVRKQ VQRCMEDMTV LITTYEGNHN HPLPPAATAM  240
ANSTSAAATM FLSSSSSTTN NEALNSTSVG VFSSMPCSIP MPTLSASAPF PTITLDMTTN  300
PLQLHQHPLH AAATFPQLLG HPVMLPQKMS HPLGQRQPSS MMETVTAAIA SDPSFTVALA  360
TAISSIIGAH GSSDGINNNS NGQSVPLLNG IPILPGSTST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-21164234877Probable WRKY transcription factor 4
2lex_A1e-21164234877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03812
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195527e-60EU019552.1 Glycine max WRKY1 (WRKY1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029129002.10.0probable WRKY transcription factor 31, partial
TrEMBLA0A151SS890.0A0A151SS89_CAJCA; Putative WRKY transcription factor 42 (Fragment)
STRINGGLYMA10G27860.21e-148(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-64WRKY family protein