PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04097
Common NameKK1_004196
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 117aa    MW: 13395.2 Da    PI: 10.8277
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04097genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-051941123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C +C + F+++  L  H++ H
  C.cajan_04097 19 FQCRYCRRQFPNSQALGGHQNAH 41
                   89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.84E-61646No hitNo description
Gene3DG3DSA:3.30.160.606.4E-41745IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.3441946IPR007087Zinc finger, C2H2
PROSITE patternPS0002802141IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MKLFGFPLKA EEVIANRSFQ CRYCRRQFPN SQALGGHQNA HKRERAKLAQ FKYLRRLRQH  60
HDRFKNEPKD LLKPTLVVAS ATSSTHAAQP FFQFHGAGGD HVDLNLTLAC SSNNFNN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04097
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601397.11e-35zinc finger protein 6
RefseqXP_028210628.11e-35zinc finger protein 6-like
TrEMBLA0A151ST222e-81A0A151ST22_CAJCA; Zinc finger protein 7
STRINGGLYMA17G03461.15e-35(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39032449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.14e-13zinc finger protein 7