PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04546
Common NameKK1_004661
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 253aa    MW: 28193.7 Da    PI: 5.5103
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04546genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.1e-20116166255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+++AeIrd s+   + +r++lg+f taeeAa a+++a+++++g
  C.cajan_04546 116 HYRGVRRRP-WGKYAAEIRDSSK---KgARVWLGTFETAEEAALAYDKAALRIRG 166
                    8********.**********543...34*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.1E-32115175IPR001471AP2/ERF domain
CDDcd000181.54E-29115174No hitNo description
PROSITE profilePS5103223.999116174IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-23116176IPR016177DNA-binding domain
SMARTSM003801.9E-37116180IPR001471AP2/ERF domain
PfamPF008471.7E-14116166IPR001471AP2/ERF domain
PRINTSPR003672.9E-11117128IPR001471AP2/ERF domain
PRINTSPR003672.9E-11140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MAIQASSEEI LENVWAKIMS SDRRGDASVD SPHSLEEQPN PDGREGSMEI LKRLPSLGRW  60
ISMGADFWEQ SLYSILTAAT NTEDSGDTIM GIGTATRHKN KVEADGVRGE KVVAKHYRGV  120
RRRPWGKYAA EIRDSSKKGA RVWLGTFETA EEAALAYDKA ALRIRGPKAY LNFPLETVVV  180
AQASETGQKG AGWDTEKSYN GMKKRKEGFV DVVNEEPVTK KMARLDRVLE NELDVFVFQD  240
LGSDYLDNLL STF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-29115177163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-29115177466ATERF1
3gcc_A1e-29115177466ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the GCC-box cis-acting elements found in the promoter regions of ethylene-responsive genes (PubMed:23057995). Acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates pathogen-responsive genes (PubMed:28733419). {ECO:0000269|PubMed:23057995, ECO:0000269|PubMed:28733419}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04546
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and infection with the fungal pathogen Botrytis cinerea. {ECO:0000269|PubMed:28733419}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210357.10.0ethylene-responsive transcription factor 1B
SwissprotA0A3Q7I5Y96e-33ERFC3_SOLLC; Ethylene-response factor C3
TrEMBLA0A151TYH00.0A0A151TYH0_CAJCA; Ethylene-responsive transcription factor ERF091 family
STRINGGLYMA13G30710.11e-102(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95473142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.13e-25ERF family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Pirrello J, et al.
    Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene.
    BMC Plant Biol., 2012. 12: p. 190
    [PMID:23057995]
  3. Du M, et al.
    MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato.
    Plant Cell, 2017. 29(8): p. 1883-1906
    [PMID:28733419]