PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04594
Common NameKK1_004711
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 344aa    MW: 38516.1 Da    PI: 6.9047
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04594genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.41.4e-28130191159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDgy+WrKYGqK+++g+++pr+YYrC+++   gC+++k+v+rs++dp+v+ei+Y+g+H+++
  C.cajan_04594 130 LDDGYTWRKYGQKSIHGAKYPRGYYRCAQRnfeGCMATKQVQRSDQDPTVFEIHYRGNHTCT 191
                    59**************************998889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.699125193IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-27127192IPR003657WRKY domain
SuperFamilySSF1182902.75E-24129192IPR003657WRKY domain
SMARTSM007749.9E-37130192IPR003657WRKY domain
PfamPF031061.3E-25131190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MGDWDCSNLI HVLQQGMEVA KQLQISLHAP YSSQESHELL IEKIIDAFEK ALKMVNLKMG  60
LVGRPSSQML HSRVAIRTSQ SPPLSGSPRN GNSDKDLREI NRSSPNERRT KPSWTKQIRV  120
TPGMGVEGSL DDGYTWRKYG QKSIHGAKYP RGYYRCAQRN FEGCMATKQV QRSDQDPTVF  180
EIHYRGNHTC TMASFAVPTL GIPENQEPNF TTIPQQQPSD AMNLHLRLGV LTENLDQSFA  240
SSFHQLLTST IKKEEQVFPS PIIENNYAQN FNCPSYVSPS DTTYFSVDNF RGHPLASSGS  300
EVNDMISAVT SAANSPTLAS LNFPFDQFHI LDGQNFTFDN SPFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-17129190768OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04594
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029126557.10.0probable WRKY transcription factor 30
TrEMBLA0A151TYR60.0A0A151TYR6_CAJCA; Putative WRKY transcription factor 41
STRINGGLYMA04G41701.11e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-44WRKY family protein