PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04712
Common NameKK1_004832
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 220aa    MW: 24534.7 Da    PI: 10.5556
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04712genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-1885118134
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                    Cs C+t++TplWR+gp g+k+LCnaCG+++rk +
  C.cajan_04712  85 CSDCNTSSTPLWRSGPKGPKSLCNACGIRQRKAR 118
                    *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577161.57E-1278119No hitNo description
SMARTSM004012.5E-1779130IPR000679Zinc finger, GATA-type
PROSITE profilePS5011413.00779115IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.5E-1583118IPR013088Zinc finger, NHR/GATA-type
CDDcd002022.23E-1284121No hitNo description
PfamPF003201.9E-1685118IPR000679Zinc finger, GATA-type
PROSITE patternPS00344085110IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007623Biological Processcircadian rhythm
GO:0009416Biological Processresponse to light stimulus
GO:0009735Biological Processresponse to cytokinin
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0009910Biological Processnegative regulation of flower development
GO:0010187Biological Processnegative regulation of seed germination
GO:0010380Biological Processregulation of chlorophyll biosynthetic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MEDRSSAGES NLGSEDSKNN VSHGSGKWMS SKMRLMQKMM RPSMSPTTDK LAINPNPRFQ  60
NQGHQSRYSQ RSPRKYNNTT TTRVCSDCNT SSTPLWRSGP KGPKSLCNAC GIRQRKARRA  120
MAEAANGLVT PMNAACAKSR VNNKENKSRT HHFAQFKNKY KYSTSTTAEG SSEGVKKLEY  180
FNDFAISLRG NSTFQQVFPR DEVAEAAMLL MDLSCGFVHL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04712
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210123.11e-164putative GATA transcription factor 22
TrEMBLA0A151TZ311e-165A0A151TZ31_CAJCA; Putative GATA transcription factor 20
STRINGGLYMA14G10830.21e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19923484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-22cytokinin-responsive gata factor 1