PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05455
Common NameKK1_005590
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 185aa    MW: 20126.3 Da    PI: 5.7125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05455genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.71.6e-0948832455
            AP2 24 e.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
                   + +g  +r kr +lg+f+taeeAa  +++a+ kl+g
  C.cajan_05455 48 KfRGvrQRpKRLWLGTFDTAEEAATEYDRAAVKLKG 83
                   335554457************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.9481591IPR001471AP2/ERF domain
PIRSFPIRSF0381234.4E-4419185IPR017392AP2/ERF transcription factor ERF/PTI6
SuperFamilySSF541711.57E-124792IPR016177DNA-binding domain
CDDcd000183.71E-194790No hitNo description
PfamPF008471.2E-54883IPR001471AP2/ERF domain
SMARTSM003805.0E-154897IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-145792IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MRIPLSYNSF SSSSSYSSAS ASTCSSEQLH KRPKKLPPSS AAGRRRSKFR GVRQRPKRLW  60
LGTFDTAEEA ATEYDRAAVK LKGPNAVTNF PLAPPAPSSP VVVVDSFSTD GGASYSDLVA  120
SPTSVLTFDS TPFDGFRYGD VDAFGFRIDA PLSLPDVDVA LTCHHGKDEE AFGEFDLDEF  180
ITWPY
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates the defense genes of plants. {ECO:0000269|PubMed:11971137}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_05455
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020202440.11e-102pathogenesis-related genes transcriptional activator PTI6
SwissprotO046826e-31PTI6_SOLLC; Pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A151U0Y41e-131A0A151U0Y4_CAJCA; Uncharacterized protein
STRINGGLYMA02G40320.19e-79(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-17cytokinin response factor 4