PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05621
Common NameKK1_005761
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 192aa    MW: 21230.8 Da    PI: 8.3562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05621genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-191868155
            AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a+++a+++++g
  C.cajan_05621 18 TRFRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEDAARAYDNAARSFRG 68
                   589*******.**********883....5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.8E-121868IPR001471AP2/ERF domain
CDDcd000181.55E-291875No hitNo description
SuperFamilySSF541711.37E-211976IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.5E-311976IPR001471AP2/ERF domain
PROSITE profilePS5103223.2611976IPR001471AP2/ERF domain
SMARTSM003802.4E-361982IPR001471AP2/ERF domain
PRINTSPR003673.3E-102031IPR001471AP2/ERF domain
PRINTSPR003673.3E-104258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MRRGRAAAAH HHPPPKETRF RGVRKRPWGR FAAEIRDPWK KARVWLGTFD SAEDAARAYD  60
NAARSFRGPK AKTNFPSPSP SPEPDQIPLY QAHGFSKFEP VVQVNRPTTS GMSSTVESFS  120
GPRVPSSHTI HPRRPVNPIA PPLDDCHSDC DSSSSVVDDD EDCVLTSSFR QPLPFDLNLP  180
PPDDLPATAL CL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-21476572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_05621
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0964474e-72BT096447.1 Soybean clone JCVI-FLGm-9J2 unknown mRNA.
GenBankKT0310724e-72KT031072.1 Glycine max clone HN_CCL_96 AP2-EREBP transcription factor (Glyma02g43500.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205259.11e-138ethylene-responsive transcription factor 3
SwissprotQ9SXS82e-40ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A151U1Q31e-136A0A151U1Q3_CAJCA; Ethylene-responsive transcription factor 3
STRINGXP_007141662.15e-89(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22633484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-29ethylene responsive element binding factor 3