PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06713
Common NameKK1_006901
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 223aa    MW: 25843.1 Da    PI: 8.6116
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06713genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-1963111355
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  C.cajan_06713  63 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 111
                    9*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.77562119IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2262120IPR016177DNA-binding domain
SMARTSM003809.0E-3862125IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-3262120IPR001471AP2/ERF domain
CDDcd000181.32E-3263120No hitNo description
PRINTSPR003674.8E-126374IPR001471AP2/ERF domain
PfamPF008473.7E-1263111IPR001471AP2/ERF domain
PRINTSPR003674.8E-1285101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034059Biological Processresponse to anoxia
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MCGGAIIADF IPRRGGRRLT ASELWPNSFA AKDDIHYANP QSSTPKAREQ VEKPVKRQRK  60
NLYRGIRQRP WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDREARKIR GKKAKVNFPN  120
EEDQFSMQPP NPTPPLPFHN PPLYHHHYPC DLNDAPKSLN FDFEKETHVI GGEEEKNKVL  180
ELSEELMAYE NYMKFYQIPY YDGQSTPPSH VQESLVGDLW SFD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-22631211574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_06713
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0977383e-64BT097738.1 Soybean clone JCVI-FLGm-22B13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239902.11e-143ethylene-responsive transcription factor ERF073
TrEMBLA0A151U4N11e-167A0A151U4N1_CAJCA; Ethylene-responsive transcription factor ERF071 family
STRINGGLYMA10G02080.11e-112(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67713449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.12e-43ERF family protein