PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06924
Common NameKK1_007119
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GeBP
Protein Properties Length: 350aa    MW: 39506.7 Da    PI: 4.4213
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06924genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.76.3e-3797192297
         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                    lfqrlw++eDei lLqG+++++a++g+s ++d+  fy+++k+++++ ++k+qlveK+rrLKkK+++ v k  sgke+sf+++hd+ +fe+s++iW 
  C.cajan_06924  97 LFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVVGKLGSGKEFSFKSPHDRATFEISRRIWS 192
                    79*********************************************************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.1E-3498192IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MASDLNDAVF PEEDLDDDED ETQEEEEEDD EDDDVLGEPD DDETEPPPSV LAAAPLSAAS  60
QALDTASIPT SADDSSPKRQ RTEQVEEKKA LDDSRRLFQR LWTDEDEIGL LQGFLEYTAQ  120
RGSSHHNDTA LFYDQIKSKL QLGFNKNQLV EKLRRLKKKY RNVVGKLGSG KEFSFKSPHD  180
RATFEISRRI WSNTAPVAAP EDDDEINPNP NFGHSVKTPL SRKRSRPRPE KRELNDRGNN  240
CIGNNNNNNK DNESCDSRNN VQVVIEETVR SCLTPVLKEF VGLVRGFGVG ALNPLPMPLI  300
LLNLGIGEMA MDEKWRRQHI LEMEVYSKRL ELMQDEIKVA LEELRSSGGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_06924
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-147AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203836.10.0probable transcription factor At5g28040
SwissprotF4K5T47e-82STKLU_ARATH; Probable transcription factor At5g28040
TrEMBLA0A151U5900.0A0A151U590_CAJCA; Uncharacterized protein
STRINGXP_007144806.11e-146(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-54DNA-binding storekeeper protein-related transcriptional regulator
Publications ? help Back to Top
  1. García-Cano E,Hak H,Magori S,Lazarowitz SG,Citovsky V
    The Agrobacterium F-Box Protein Effector VirF Destabilizes the Arabidopsis GLABROUS1 Enhancer/Binding Protein-Like Transcription Factor VFP4, a Transcriptional Activator of Defense Response Genes.
    Mol. Plant Microbe Interact., 2018. 31(5): p. 576-586
    [PMID:29264953]