PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07037
Common NameKK1_007237
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C3H
Protein Properties Length: 389aa    MW: 42384.7 Da    PI: 8.4669
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07037genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.58.2e-121945127
                   --S---SGGGGTS--TTTTT-SS-SSS CS
        zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                   ++++ C+++ rtG C++G++C+F+H+p
  C.cajan_07037 19 PGEPDCSYYIRTGVCRFGATCRFNHPP 45
                   5789*********************97 PP
2zf-CCCH31.33.6e-105069827
                   GGGGTS--TTTTT-SS-SSS CS
        zf-CCCH  8 ffartGtCkyGdrCkFaHgp 27
                   ++++tGtCk+G++CkF+H++
  C.cajan_07037 50 YYLKTGTCKFGATCKFHHPK 69
                   8*****************96 PP
3zf-CCCH38.71.6e-1291115327
                    S---SGGGGTS--TTTTT-SS-SSS CS
        zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                    +++C +++rtG+Ck+G++CkF+H++
  C.cajan_07037  91 EPECTYYLRTGQCKFGNTCKFHHPQ 115
                    799********************97 PP
4zf-CCCH38.12.6e-12251277127
                    --S---SGGGGTS--TTTTT-SS-SSS CS
        zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                    +++++C+f+++tG Ck+G+ C+F+H++
  C.cajan_07037 251 PGQPECQFYMKTGDCKFGAVCRFHHPR 277
                    5789*********************96 PP
5zf-CCCH38.32.3e-12297323127
                    --S---SGGGGTS--TTTTT-SS-SSS CS
        zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                    ++++lC f++r+G+Ck+G++CkF H++
  C.cajan_07037 297 PGEPLCVFYSRYGICKFGPSCKFDHPM 323
                    589**********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5010314.5871846IPR000571Zinc finger, CCCH-type
SMARTSM003563.3E-51845IPR000571Zinc finger, CCCH-type
PfamPF006422.9E-82045IPR000571Zinc finger, CCCH-type
SuperFamilySSF902293.4E-52346IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.103.8E-42444IPR000571Zinc finger, CCCH-type
SMARTSM003560.0264669IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.102.7E-45069IPR000571Zinc finger, CCCH-type
PfamPF006424.2E-85069IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010310.4745070IPR000571Zinc finger, CCCH-type
SMARTSM003566.6E-688115IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.93988116IPR000571Zinc finger, CCCH-type
PfamPF006424.3E-1091115IPR000571Zinc finger, CCCH-type
SuperFamilySSF902292.09E-691116IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.101.7E-494114IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.596250278IPR000571Zinc finger, CCCH-type
SMARTSM003567.8E-6250277IPR000571Zinc finger, CCCH-type
PfamPF006428.1E-9252277IPR000571Zinc finger, CCCH-type
SuperFamilySSF902298.9E-6254280IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.105.8E-5256278IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.821296324IPR000571Zinc finger, CCCH-type
SMARTSM003561.4E-7296323IPR000571Zinc finger, CCCH-type
PfamPF006424.1E-9298323IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.57E-5299323IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.106.0E-4301321IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0017148Biological Processnegative regulation of translation
GO:0005829Cellular Componentcytosol
GO:0010313Molecular Functionphytochrome binding
GO:0046872Molecular Functionmetal ion binding
GO:0048027Molecular FunctionmRNA 5'-UTR binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MVKFSSGETM DSGTYPERPG EPDCSYYIRT GVCRFGATCR FNHPPNRKLY YLKTGTCKFG  60
ATCKFHHPKD QAGIAGIVAL NILGYPLRPN EPECTYYLRT GQCKFGNTCK FHHPQPSNMM  120
LSLRGSPVYP TVHSPTTPGQ QSYAGGITNW SRASYIPSPR WQSPSSYAPL ILPQGVVSVP  180
GWSAYSGQMG SISTSDSPQQ AMRNGQTFGT SRQGELANAG SPHGAYSQFR SSTVPVGFYA  240
LQRENIFPER PGQPECQFYM KTGDCKFGAV CRFHHPRERL IPAPDCVLSP MGLPLRPGEP  300
LCVFYSRYGI CKFGPSCKFD HPMGIFTYNI PASPSADAPS RHLLGSSSGT AALNLSSEGH  360
VESSSGRRLS LSETGQIPSG DNDIDDDVS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07037
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237153.10.0zinc finger CCCH domain-containing protein ZFN-like
SwissprotQ9SWF90.0ZFNL_PEA; Zinc finger CCCH domain-containing protein ZFN-like
TrEMBLA0A151U5F40.0A0A151U5F4_CAJCA; Uncharacterized protein
STRINGGLYMA20G36140.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53213355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02830.11e-150zinc finger protein 1