PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07076
Common NameKK1_007277
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ZF-HD
Protein Properties Length: 197aa    MW: 22459.4 Da    PI: 8.6776
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07076genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.23.4e-321671359
    ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    +rYkeClkNhAa++Gg+a+DGCgEfm++ geegt +alkC+AC+CHRnFHR+e e+
  C.cajan_07076 16 IIRYKECLKNHAAAIGGNATDGCGEFMAA-GEEGTLEALKCSACNCHRNFHRKEIES 71
                   589*************************9.999*********************886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257741.0E-221771IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.7E-291769IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015667.8E-301869IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.9611968IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.601.1E-29124193IPR009057Homeodomain-like
SuperFamilySSF466893.33E-18127192IPR009057Homeodomain-like
TIGRFAMsTIGR015655.2E-28131188IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MDSSSFQCDK RVDKKIIRYK ECLKNHAAAI GGNATDGCGE FMAAGEEGTL EALKCSACNC  60
HRNFHRKEIE SSSDSNSTPL MIIPDTTQIR PMLTYLSPNK SGSISPSDQS DEKDYEDGIV  120
KEVENPNEKV KKRFRTKFTQ EQKEKMLDFA ERAGWRIQKL DESVVQKFCH DVGIKRRVFK  180
VWMHNNKNTF AKKNPST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A4e-241321891875ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. Probably involved in the regulation of floral induction. {ECO:0000269|PubMed:22319055}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07076
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by exposure to long days. {ECO:0000269|PubMed:22319055}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2354230.0AC235423.1 Glycine max strain Williams 82 clone GM_WBb0137C18, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231898.11e-148zinc-finger homeodomain protein 4
SwissprotQ9M9S05e-63ZHD4_ARATH; Zinc-finger homeodomain protein 4
TrEMBLA0A151U5T31e-146A0A151U5T3_CAJCA; ZF-HD homeobox protein At4g24660 family
STRINGGLYMA20G35690.21e-118(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20634253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.24e-63homeobox protein 31