PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07682
Common NameKK1_007893
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 384aa    MW: 42373.2 Da    PI: 8.1493
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07682genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.8e-10179226455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  C.cajan_07682 179 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 226
                    8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.23E-17173244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.26E-10173230No hitNo description
Gene3DG3DSA:4.10.280.103.1E-17175242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.618175225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-7179226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-9181231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MLHCAKTSGL ERQRARMKWE EEEGLFCGLS GVLSSNSSSL HVHESMMVAA DSGSALAEVV  60
AQAGSINMPT AGSPSISRTF SCPPTLVEPK PKPKPAASSI GIKKRKPHSP KFVAENDSSK  120
DKRIKVGAHD GESKITGTNN NREETCADTS NSKQNSKLSE VQKPDYIHVR ARRGQATDSH  180
SLAERVRREK ISERMKYLQD LVPGCNKITG KAGMLDEIIN YVQSLQRQVE FLSMKLAAVN  240
PRLDFSVDDL FDKEVFPACA ANFPNMGMSS DMTNYLQFNS PQQQQIVSYG GLDTGINPSD  300
MGLRRTISAP VSMPEETYLP SSCFTVSFPS IYLSLVILVQ QMLPFSTWEG GFQNHCNFDF  360
PSQLFSGNYK FVPCRITFFL SLVS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07682
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1405841e-103BT140584.1 Medicago truncatula clone JCVI-FLMt-18N21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208216.10.0transcription factor bHLH63
TrEMBLA0A151U7B50.0A0A151U7B5_CAJCA; Transcription factor bHLH63
STRINGGLYMA04G01400.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.14e-57bHLH family protein