PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07782
Common NameKK1_008007
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 311aa    MW: 34079.5 Da    PI: 4.4635
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07782genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.7e-112352751055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  C.cajan_07782 235 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 275
                    9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-14222291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.301225274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-13230284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-11231280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-8235275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MDPSEQISEE WSSLSGFYTA EEADFMSQFL DNCSLPENLC GNFNFGIPSA IWPGHESTIV  60
SVTGINGTPY FPANADNSNT NYLCFLQGSS STSDNSIIFP TTSEVIADQN LQDHQECEVV  120
VSEAAEEDIN TNVEMSGKRS RGSMQGRKSK KNVKSTKKTK SDSTSNFEEG RSPGVQGQSL  180
SSSCSEDDES NASQELNGGG TSSLSLEDST TLKLKGKKST SNRGSATDPQ SVYARRRRER  240
INERLRILQN LVPNGTKVDI STMLEEAVQY VKFLQLQIKL LSSDDLWMYA PIAYNGMNIG  300
LDLNITPTKQ P
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07782
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351771e-122AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210482.10.0transcription factor bHLH84
TrEMBLA0A151U7M60.0A0A151U7M6_CAJCA; Transcription factor bHLH84
STRINGGLYMA20G26991.11e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-38bHLH family protein