PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07813
Common NameKK1_008040
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 274aa    MW: 29753.2 Da    PI: 8.0949
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07813genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000571461831254
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    R +++ ++++ L++l+ +      +K + a++L +A+ YI+ L
  C.cajan_07813 146 RKEKLGERIAALQQLVSPF-----GKTDTASVLHEAMGYIRFL 183
                    77788899********998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.906134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-7145190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.66E-5145188No hitNo description
SuperFamilySSF474591.96E-10145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MEEAKEELIT GTSFSQLLFG DDDHHQTALP LAVDQDHSCT YNLTRSPLFS IHNTPKMLCF  60
ANHQSQQGLL LPQTNVTPQK SVITSSDSSS ASSCNYTNTC SNSLPKSNKK RNGLGKEAVT  120
KVGVGGQRQP KKTKAENPTS TGHAKRKEKL GERIAALQQL VSPFGKTDTA SVLHEAMGYI  180
RFLHDQVQVL CSPYLQSLPS SYHQNHHGDG DNNEEEVRKD LRSRGLCLIP VGCTIHVAGS  240
NGADFWSPAA IGSNVSPSAK PSSETKPMNP FQNL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07813
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0918655e-97BT091865.1 Soybean clone JCVI-FLGm-9A23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239175.10.0transcription factor bHLH113 isoform X2
TrEMBLA0A151U7S70.0A0A151U7S7_CAJCA; Transcription factor bHLH113 family
STRINGGLYMA20G26630.11e-135(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103212129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.11e-49bHLH family protein