PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08024
Common NameKK1_008267
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 57aa    MW: 6488.57 Da    PI: 10.4332
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08024genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.72e-111039130
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                     +++WT+eE++ l+ +v ++G g Wk+I + 
    C.cajan_08024 10 KNKWTKEEEKALIAGVMKHGEGFWKKILQD 39
                     689************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-12455IPR009057Homeodomain-like
PROSITE profilePS500906.795555IPR017877Myb-like domain
SuperFamilySSF466896.53E-11855IPR009057Homeodomain-like
PfamPF002491.8E-91038IPR001005SANT/Myb domain
CDDcd116601.71E-121255No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    Send to blast
MATSKQKIAK NKWTKEEEKA LIAGVMKHGE GFWKKILQDP EFSDVLSSRS NVNIKVI
Functional Description ? help Back to Top
Source Description
UniProtBinds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08024
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012469639.12e-14PREDICTED: telomere repeat-binding factor 2-like isoform X2
RefseqXP_016680428.12e-14PREDICTED: telomere repeat-binding factor 2-like
RefseqXP_016697329.12e-14PREDICTED: telomere repeat-binding factor 2-like
RefseqXP_016706224.12e-14PREDICTED: telomere repeat-binding factor 2-like isoform X2
RefseqXP_017624388.12e-14PREDICTED: telomere repeat-binding factor 2-like isoform X2
RefseqXP_017628203.12e-14PREDICTED: telomere repeat-binding factor 2-like
RefseqXP_017628204.12e-14PREDICTED: telomere repeat-binding factor 2-like
RefseqXP_022775106.12e-14telomere repeat-binding factor 2-like isoform X2
SwissprotQ8W1191e-14SMH4_MAIZE; Single myb histone 4
TrEMBLA0A151U8C56e-33A0A151U8C5_CAJCA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32282958
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.11e-16MYB_related family protein
Publications ? help Back to Top
  1. Soderlund C, et al.
    Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
    PLoS Genet., 2009. 5(11): p. e1000740
    [PMID:19936069]