PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08120
Common NameKK1_008364
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 141aa    MW: 16554.6 Da    PI: 5.5437
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08120genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3469.8e-154791798
                   E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
             B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    +p+kf++++g     s  + ++ ++g +W+v    +++ g+++++kGWkeFv+   L+ g  v+Fk++g+s     v +++
  C.cajan_08120  4 KIPNKFTQKCGRG--LSNPVFIKPPDGTEWKVHW--TNQNGEVWFKKGWKEFVENYSLDHGHLVLFKYEGTSHM--DVLILD 79
                   59********744..6667***************..********************************986544..666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010190.0013181IPR003340B3 DNA binding domain
PROSITE profilePS5086313.451181IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.106.4E-19380IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.16E-17488IPR015300DNA-binding pseudobarrel domain
PfamPF023624.5E-12572IPR003340B3 DNA binding domain
CDDcd100171.17E-12579No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
YSQKIPNKFT QKCGRGLSNP VFIKPPDGTE WKVHWTNQNG EVWFKKGWKE FVENYSLDHG  60
HLVLFKYEGT SHMDVLILDQ TELEIHYPLC DTPQENDNLN QSDDDESSVV VLDEWPHQNA  120
VTQSRPRKKM RCMDPIVCLF F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124130RPRKKMR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08120
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210735.14e-93B3 domain-containing protein At1g49475
TrEMBLA0A151TQ651e-102A0A151TQ65_CAJCA; B3 domain-containing protein At1g49475 family (Fragment)
STRINGGLYMA20G24268.12e-48(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.12e-18B3 family protein