PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_08200

Common Name

KK1_008445

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

bZIP

Protein Properties

Length: 352aa MW: 39853.5 Da PI: 6.8109

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_08200	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.7	1.4e-09	67	95	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKk ++++Le C.cajan_08200 67 KMLRRLAQNREAARKSRLRKKVYVKQLES 95 6679***********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.003	62	123	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.48E-6	67	99	No hit	No description
Pfam	PF00170	6.4E-7	67	101	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.8E-7	69	100	No hit	No description
PROSITE pattern	PS00036	0	70	85	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	5.7E-27	156	229	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence Send to blast
MKMDIYEPFQ QVSMWGDSFK VNGGLNSIAS PILMVDTSME NKSEYIPQES REPSGADQET 60 TNKDVNKMLR RLAQNREAAR KSRLRKKVYV KQLESSRLKL LQLELEIEKA RKQGLYMGTT 120 LDAGYIGSSS ETINPAIVAF EFEYGQWVEE QQRRNEELRH AFQTQAPDAQ LHALVQSVLN 180 HYSSLFRMKA DAAKADVLYL ISGVWKASVE RIFLWIGGSR PSQLLNIIVP QLEFLTEEQI 240 NRINNIRLSS QQAEDALSQG LEKLQQSLVN DMAVDPLGAG NLGLQMALAM EKFEALEGFV 300 NQADHLRQQT LLHMSRVLSA QQAARGLLAL GEYFHRLRTL CSLWAARPSE LP

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence Send to blast

MKMDIYEPFQ QVSMWGDSFK VNGGLNSIAS PILMVDTSME NKSEYIPQES REPSGADQET  60
TNKDVNKMLR RLAQNREAAR KSRLRKKVYV KQLESSRLKL LQLELEIEKA RKQGLYMGTT  120
LDAGYIGSSS ETINPAIVAF EFEYGQWVEE QQRRNEELRH AFQTQAPDAQ LHALVQSVLN  180
HYSSLFRMKA DAAKADVLYL ISGVWKASVE RIFLWIGGSR PSQLLNIIVP QLEFLTEEQI  240
NRINNIRLSS QQAEDALSQG LEKLQQSLVN DMAVDPLGAG NLGLQMALAM EKFEALEGFV  300
NQADHLRQQT LLHMSRVLSA QQAARGLLAL GEYFHRLRTL CSLWAARPSE LP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269\|PubMed:12953119}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_08200

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015035	1e-105	AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020212517.1	0.0	transcription factor TGA3 isoform X1
Refseq	XP_029126618.1	0.0	transcription factor TGA3 isoform X1
Swissprot	Q93ZE2	1e-124	TGA7_ARATH; Transcription factor TGA7
TrEMBL	A0A151TQE0	0.0	A0A151TQE0_CAJCA; Transcription factor TGA7
STRING	GLYMA04G43411.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1096	34	104

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-107	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]