PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08345
Common NameKK1_008592
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 433aa    MW: 50237.2 Da    PI: 7.8673
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08345genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix76.73.7e-24179887
       trihelix  8 laLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                   +aL+++r++m+ ++r++  k+plWe+vs+k++e g++rs+k+Ckek+en+ k+++++keg+ ++ s++ +t+++f+qlea
  C.cajan_08345  1 MALLKIRSDMDLAFRDSTPKAPLWEQVSRKLEEVGYHRSAKKCKEKFENIYKYHRRTKEGRCGK-SNAAKTYRFFEQLEA 79
                   58************************************************************96.78888********85 PP
2trihelix932.9e-29246345187
       trihelix   1 rWtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                    rW+k+ev aLi++r+++e +++ ++              +k+plWee+s +m++ g+ rs+k+Ckekwen+nk++k++ke +k++ +++s+tcpy+
  C.cajan_08345 246 RWPKDEVEALIRLRTQLEVQSQGNNnnnndnnsttnnngSKGPLWEEISLAMKSLGYDRSAKRCKEKWENINKYFKRMKEKNKRK-PQDSKTCPYY 340
                    8**************777777754344566677777777********************************************96.9********* PP

       trihelix  83 dqlea 87 
                    ++lea
  C.cajan_08345 341 HHLEA 345
                    **985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500905.273151IPR017877Myb-like domain
CDDcd122031.50E-15258No hitNo description
PfamPF138376.0E-15280No hitNo description
SMARTSM007176.5E-5243319IPR001005SANT/Myb domain
CDDcd122036.08E-19245324No hitNo description
PfamPF138371.0E-19245346No hitNo description
Gene3DG3DSA:1.10.10.603.7E-4245316IPR009057Homeodomain-like
PROSITE profilePS500906.876245317IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MALLKIRSDM DLAFRDSTPK APLWEQVSRK LEEVGYHRSA KKCKEKFENI YKYHRRTKEG  60
RCGKSNAAKT YRFFEQLEAL DHSLPQPDNN DVHVVIREAH AGEHSSSTTW NNKSRKMKMT  120
QFLEALMREV IEKQEVLQKN FMEVLDKCER ERLAREEAWK KEELARIKRE RELLAQERSI  180
AAAKDEAVLA FLRKFAEAQG TVQLLHKIQV PNKDMQQNGN DVTHMDKHQE CGNVAVGSLV  240
HVTASRWPKD EVEALIRLRT QLEVQSQGNN NNNNDNNSTT NNNGSKGPLW EEISLAMKSL  300
GYDRSAKRCK EKWENINKYF KRMKEKNKRK PQDSKTCPYY HHLEALYSKR PKKVDESGGC  360
DTNNNSSGNE LKPEELLLHI MESQEERQQQ QQQHMDESSS EDAERENTDQ NEDQSGYQNQ  420
TVDNSPASIA IMS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08345
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212111.10.0trihelix transcription factor GT-2
SwissprotQ391171e-64TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A151TQR60.0A0A151TQR6_CAJCA; Uncharacterized protein
STRINGGLYMA09G19750.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.21e-64Trihelix family protein