PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08435
Common NameKK1_008683
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 313aa    MW: 34533.6 Da    PI: 8.3205
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08435genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.9e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++++k++G g+W++ ++  g+ R++k+c++rw +yl
    C.cajan_08435 14 KGAWTKEEDQRLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding58.51.5e-1867111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T++Edel+++++ +lG++ W++Ia++++ gRt++++k++w+++
    C.cajan_08435  67 RGNFTEDEDELIINLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.3E-24564IPR009057Homeodomain-like
PROSITE profilePS5129417.89961IPR017930Myb domain
SMARTSM007173.9E-141363IPR001005SANT/Myb domain
SuperFamilySSF466891.8E-2913108IPR009057Homeodomain-like
PfamPF002495.5E-161461IPR001005SANT/Myb domain
CDDcd001673.54E-111661No hitNo description
PROSITE profilePS5129428.81162116IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.1E-2865116IPR009057Homeodomain-like
SMARTSM007179.3E-1866114IPR001005SANT/Myb domain
PfamPF002495.9E-1767111IPR001005SANT/Myb domain
CDDcd001671.04E-1269112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MGRSPCCEKE HTNKGAWTKE EDQRLINYIK LHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEDEDELIIN LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIKRKLYSRG  120
IDPQTHRPLN ASASPAATAA VVPVVTVTSS NNKNDQDSSS SNNNNNNNNG FQLVSSGYVN  180
AKIGSDLVGE DSNSSSGVTT EEALPHHQLN LDLSIGLPSQ PHVNTEKLKQ QMQTQPHEHD  240
QKPHVLYQWY GNITGQGVCL CYSLGLQSNQ ACYCKAMGAA AAAAAVTAAT TTTAVTTTAT  300
EDNLYRLYRP MNI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-29141167108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000305}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08435
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0971271e-160BT097127.1 Soybean clone JCVI-FLGm-21J21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212475.10.0myb-related protein 308
SwissprotP813953e-91MYB30_ANTMA; Myb-related protein 330
TrEMBLA0A151TR110.0A0A151TR11_CAJCA; Myb-related protein 330 family
STRINGXP_007137818.11e-157(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26434221
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.11e-85myb domain protein 7
Publications ? help Back to Top
  1. Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C
    Expression patterns of myb genes from Antirrhinum flowers.
    Plant Cell, 1991. 3(2): p. 115-25
    [PMID:1840903]