PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08656
Common NameKK1_008909
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 267aa    MW: 30024.9 Da    PI: 6.4032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08656genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.5e-08160207455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR +iN+++  L+ ++P +     k +  a +L + ++Y++sLq
  C.cajan_08656 160 SHSLAERVRRGKINEKLRCLQNIVPGC----YKTMGMAVMLDEIINYVQSLQ 207
                    8*************************9....35599999**********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.66E-9154211No hitNo description
SuperFamilySSF474591.57E-15154222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-15156215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.723156206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-5160207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-7162212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MAEYTENLQS IRPSSFPFLD IDPSMELLNQ FIGMNQHVLE NTNLTMHNLM PFSCDTFLGP  60
QEPEFPGNLE ENFPSLNSLP VSLPIFQAEN EFHEGKKRKT MDLPETSSAN STPAVSDSGT  120
GSKIKHSSGR GKRVKNNVTD EEKAKEVVHV RARRGQATDS HSLAERVRRG KINEKLRCLQ  180
NIVPGCYKTM GMAVMLDEII NYVQSLQHQV EFLSLKLTAA STFYDFNSET DALETMQRAR  240
ASEAKELAKY KREGYGGVSC FQPTWPL
Functional Description ? help Back to Top
Source Description
UniProtPositive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08656
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312560.0KT031256.1 Glycine max clone HN_CCL_43 bHLH transcription factor (Glyma07g10311.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213827.10.0transcription factor BEE 3
SwissprotQ8GWK76e-64BEE3_ARATH; Transcription factor BEE 3
TrEMBLA0A151TRN80.0A0A151TRN8_CAJCA; Transcription factor BEE 3
STRINGXP_007154151.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.12e-66BR enhanced expression 3
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]