PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09292
Common NameKK1_009553
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 209aa    MW: 23169.1 Da    PI: 9.9032
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09292genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.12.8e-1591135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
    C.cajan_09292  91 PWTEEEHRIFLVGLEKLGKGNWRDISRNFVTTRTPTQVASHAQKY 135
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501588.614522IPR001878Zinc finger, CCHC-type
PROSITE profilePS5129419.61184140IPR017930Myb domain
SuperFamilySSF466893.59E-1884141IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-1887139IPR006447Myb domain, plants
SMARTSM007171.2E-1188138IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.7E-1288134IPR009057Homeodomain-like
CDDcd001671.13E-1091136No hitNo description
PfamPF002499.7E-1391135IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MGIARKCSYC GNLGHNARTC KSLSHGQPKL FGDQLGGYYS SSLPSYSATK ISLSPNNLFS  60
SHVSSSFSLP PLLPANHNSD SYFQHTKKGV PWTEEEHRIF LVGLEKLGKG NWRDISRNFV  120
TTRTPTQVAS HAQKYFLRQS NNTFNRTKHS STLFHWLSHP HSALNWPTTS TDCTLQSASL  180
DLELKLATPK PLELVDAYSA GLSKLTTSV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09292
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020211344.11e-153transcription factor MYBS3
TrEMBLA0A151TTF61e-152A0A151TTF6_CAJCA; Myb-like protein J
STRINGGLYMA06G05450.26e-73(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF151421013
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.15e-37MYB_related family protein