PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09313
Common NameKK1_009577
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 334aa    MW: 38399.3 Da    PI: 6.7519
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09313genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.92e-092622962155
                    HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
       Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                    k +yps++e+  LA+ +gL+++q+ +WF N+R ++
  C.cajan_09313 262 KWPYPSESEKVALAEATGLDQKQINNWFINQRKRH 296
                    669*****************************885 PP
2ELK36.31.2e-12216237122
            ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                    ELK +LlrKYsgyL+sLkqE+s
  C.cajan_09313 216 ELKSHLLRKYSGYLSSLKQELS 237
                    9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012557.7E-1884128IPR005540KNOX1
PfamPF037903.5E-1985127IPR005540KNOX1
SMARTSM012562.4E-28135186IPR005541KNOX2
PfamPF037914.3E-24140185IPR005541KNOX2
SMARTSM011885.6E-7216237IPR005539ELK domain
PROSITE profilePS5121311.069216236IPR005539ELK domain
PfamPF037893.1E-9216237IPR005539ELK domain
PROSITE profilePS5007112.892236299IPR001356Homeobox domain
SuperFamilySSF466891.15E-19237311IPR009057Homeodomain-like
SMARTSM003894.1E-13238303IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.2E-27241302IPR009057Homeodomain-like
CDDcd000861.46E-11248300No hitNo description
PfamPF059209.9E-17256295IPR008422Homeobox KN domain
PROSITE patternPS000270274297IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MEEFTNNHLS ENTSPRANLL YSLACGSSVG NRHQQLPFNT FHLQSGGSGH CFQPDQVKTE  60
STNFHYPLMS PNLQGGTQSS DEIEAIKAKI IAHPHYLNLL QVYTDCQKVG APPEAVARLA  120
AVLQDFEARQ RSMVRSRESC KDPELDQFME AYYDMLVKYR EELTRPIQEA MDFMRGVETQ  180
LNTLCNGTVR IFSEVHENSG GETEVAEIDP QVEDRELKSH LLRKYSGYLS SLKQELSKKK  240
KKGKLPKDAR QKLLSWWELH YKWPYPSESE KVALAEATGL DQKQINNWFI NQRKRHWKPS  300
EDMQFMVMDG LHSQNATLYM DGHYLADGHY RLGP
Functional Description ? help Back to Top
Source Description
UniProtProbably binds to the DNA sequence 5'-TGAC-3'.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09313
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM1070021e-126HM107002.1 Glycine max KNOX-like DNA-binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213115.10.0homeobox protein knotted-1-like 2
SwissprotO041351e-149KNAP2_MALDO; Homeobox protein knotted-1-like 2
TrEMBLA0A151TTN60.0A0A151TTN6_CAJCA; Homeobox protein knotted-1-like 2
STRINGGLYMA04G05210.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45843246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08150.11e-119KNOTTED-like from Arabidopsis thaliana