PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09364
Common NameKK1_009629
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 130aa    MW: 14578.4 Da    PI: 7.5097
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09364genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-115394955
                   HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  C.cajan_09364 53 ARKRRERINERLRILQNLVPNG-----TKVDISSMLEEAVHYVKFLQ 94
                   69******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-1544111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.1424493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-1349111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.06E-115098No hitNo description
SMARTSM003531.1E-115099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-85394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MNNQKLDKNG NEAEETNGSC SSSSHTYTPE DDNASALSLK GKTKATDPQS LNARKRRERI  60
NERLRILQNL VPNGTKVDIS SMLEEAVHYV KFLQLQIKLL SSDDLWMYAQ IAYNGLDIVL  120
NLTQKSSPPL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09364
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By jasmonic acid (JA) treatment. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029127044.14e-90transcription factor bHLH54
SwissprotQ84WK01e-48BH085_ARATH; Transcription factor bHLH85
TrEMBLA0A151TTK68e-91A0A151TTK6_CAJCA; Transcription factor bHLH85
STRINGGLYMA04G04801.15e-64(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.16e-38root hair defective 6-like 4
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Rymen B, et al.
    ABA Suppresses Root Hair Growth via the OBP4 Transcriptional Regulator.
    Plant Physiol., 2017. 173(3): p. 1750-1762
    [PMID:28167701]
  3. Han H, et al.
    Altered expression of the TaRSL2 gene contributed to variation in root hair length during allopolyploid wheat evolution.
    Planta, 2017. 246(5): p. 1019-1028
    [PMID:28770336]