PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09369
Common NameKK1_009634
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family LBD
Protein Properties Length: 167aa    MW: 18419.2 Da    PI: 8.2975
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09369genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26088.67.9e-282103197
         DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 
                    +C++C+vlr++C++ C l+  +     p++q++++ +++k+FG++ ++ +++++p+++r+++++sl++eA+ r+ +Pv+Gavg++ +++++++q++
  C.cajan_09369   2 SCNGCRVLRKRCSERCSLRSSLqwihsPQAQAHATLFLAKFFGRTDLMFFISSVPQQNRPALFQSLLFEACGRIINPVNGAVGLLCTGNWHMCQAA 97 
                    6**********************************************************************************************9 PP

         DUF260  92 aelall 97 
                    ++++l+
  C.cajan_09369  98 VDTVLA 103
                    998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5089117.2291107IPR004883Lateral organ boundaries, LOB
PfamPF031955.2E-242101IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MSCNGCRVLR KRCSERCSLR SSLQWIHSPQ AQAHATLFLA KFFGRTDLMF FISSVPQQNR  60
PALFQSLLFE ACGRIINPVN GAVGLLCTGN WHMCQAAVDT VLAGGLLRPL PEVAPPAFDE  120
SSDAMFSQFQ AVASDSFKRT STADTSLVSE ESQMANYNHK KLLNLFV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09369
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210760.11e-122LOB domain-containing protein 38
SwissprotQ9SN239e-57LBD38_ARATH; LOB domain-containing protein 38
TrEMBLA0A151TTN21e-120A0A151TTN2_CAJCA; LOB domain-containing protein 38
STRINGGLYMA04G04750.13e-71(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72134136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.18e-50LOB domain-containing protein 38