PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09523
Common NameKK1_009791
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 378aa    MW: 42063.8 Da    PI: 9.8113
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09523genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.2e-13306351655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++Er RR ri +++ +L+el+P+      k  s ae+L +AveYIk+Lq
  C.cajan_09523 306 SIAERVRRTRISERIRKLQELVPNM----EKQTSTAEMLDLAVEYIKDLQ 351
                    689*********************7....477*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.523300350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-16303366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-12304353No hitNo description
Gene3DG3DSA:4.10.280.103.4E-14305362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.7E-12306356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-10306351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048573Biological Processphotoperiodism, flowering
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MDSNSRYQVQ QPNSGLLRFR SAPAPVLANF KQGQAVNNGN PWEGSETVFR FFNSDTTTWP  60
RLREFVDNKV APNNAAKESS SPLGRMNSQQ GYTTSSSSVL PLPPRHDSGV TSDIMLGSIG  120
MDQSTNKSFN SHLLRQSSFP NNISFQNGYD AMKGVGNYGG VNDNDGELSL SMNRMKSQIS  180
FSSRNPSSLG MLSPNSKMGN EGVGINSPED GRHEGSNGDA RYFGPGFSYA SWDDTSHLKR  240
KRNSNDELLS DAQHGEVGNQ VHTLSHQLSL PRTSSEMFAM DNLLQFTDSV PCKIRAKRGF  300
ATHPRSIAER VRRTRISERI RKLQELVPNM EKQTSTAEML DLAVEYIKDL QKQFKTLSER  360
RAKCKCINIH KSETNQIA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00308DAPTransfer from AT2G42280Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09523
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150379e-50AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213881.10.0transcription factor bHLH130
TrEMBLA0A151TU870.0A0A151TU87_CAJCA; Transcription factor bHLH130 family
STRINGXP_007162279.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51773253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-58bHLH family protein