PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09665
Common NameKK1_009938
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 209aa    MW: 23077.1 Da    PI: 9.7662
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09665genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000133254123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y C+ C++ F++   L  H+++H
  C.cajan_09665 32 YACSFCKREFKSAQALGGHMNVH 54
                   89*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.66E-62958No hitNo description
Gene3DG3DSA:3.30.160.607.6E-43057IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.1363259IPR007087Zinc finger, C2H2
PfamPF139121.9E-63255IPR007087Zinc finger, C2H2
SMARTSM003550.00793254IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803454IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MEGNYVTRNM HKGERFGFEE HSWGSSWTAR NYACSFCKRE FKSAQALGGH MNVHRRDRAR  60
LRSSLPSSWV SESPKPNPSI KPNNPYPTHL SPSSPSSFLS NKLLNCAHIS PLCSPPLALS  120
SSLTPASSNG DKKPRLLPLS IPQSSEEIKT SKNTGSGLGV EEAQGCVIGE EHKGFNFKSN  180
EHNIKLELGI GLLKQPKEKL DLELRLGHF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09665
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213690.11e-151transcriptional regulator SUPERMAN
TrEMBLA0A151TUI01e-150A0A151TUI0_CAJCA; Transcriptional regulator SUPERMAN
STRINGGLYMA19G34531.12e-89(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28433171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.19e-19zinc-finger protein 10