PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09728
Common NameKK1_010006
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 468aa    MW: 51597.7 Da    PI: 7.6266
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09728genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.71.4e-15285331455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+ Y+ksLq
  C.cajan_09728 285 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAISYLKSLQ 331
                    6*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-20279347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.076281330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.34E-16284335No hitNo description
PfamPF000103.6E-13285331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-20285339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-18287336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MELLWQNGQV VMHSQNHRSL RKPPLQNYNP HLFMQEGQMP SWLHYPIDDV HPPFEFDQTF  60
CADFLHSPPT VNNNTAMQTL GPSSHLTDLR PPPSPRPPIP PPRRPDPETQ NFAYFSRHSA  120
RAEPSVKTAA RESTVVDSCD TAAAASRVSS AAEGAGGVAA PSTMMCDVTM TTSGGSSSSG  180
EPVQVAAAEE RKRKGREAAA EEWECQSEVS GLILNHRRFV VSHITSHHGC TLAMRWSLLS  240
CADFSSCIFL FHFVLLEIKD VDFESEAKKQ ARGSTSTKRS RAAEVHNLSE RRRRDRINEK  300
MKALQELIPR CNKSDKASML DEAISYLKSL QLQVQMMSMG CGMVPMMFPG IQQYMPAIGM  360
GVGMGMGMEM GMNRPVIPFP NMLPGSAMPA ATAATHLGPR MQAAKTDNNM VTSAGPPDPN  420
QSRIPNITDP YQQYLGPHQM QFQLNQAMNQ PNVSKPSTSK GLENPESH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289294ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09728
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311021e-179KT031102.1 Glycine max clone HN_CCL_196 bHLH transcription factor (Glyma03g32747.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213332.10.0transcription factor PIF1
TrEMBLA0A151TUP40.0A0A151TUP4_CAJCA; Transcription factor PIF1
STRINGGLYMA03G32747.31e-179(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46073351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.18e-40phytochrome interacting factor 3-like 5