PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10677
Common NameKK1_010986
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 512aa    MW: 57220.4 Da    PI: 7.9825
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10677genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH451.9e-14332377454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     hn  E++RR++iN+++ +L+el+P++      K++Ka++L  A++Y+k L
  C.cajan_10677 332 VHNLSEKKRREKINKKMRTLKELIPNC-----NKVDKASMLDDAIDYLKTL 377
                    5*************************8.....6****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.97E-19326392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.51E-16326382No hitNo description
PROSITE profilePS5088817.657328377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.5E-12332377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-18332387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.4E-16334383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MIQKMFDSTR SGMTRSSSHM ASIYENDFLE LVWENGEVVV RGGSSNGTKK SHEERILHDH  60
QDGSITKRTR LNTLYSLEDH FPHLRDSEMT SSSSHQSNNG QDSCQSSQRK NSCKLNEEFA  120
NLFTPVKDSR PVTTDIGHLQ QCLPSSPLKK QITDSTQTPL ATNQMTTKVN FSNFSIPAVF  180
LKQGNSATQQ TKEASKVEKV AADESAKESH GFLKQTFLTV ERSSKPLPPV DEHSEAVGTH  240
RFRGQGFDQM PSSETLRAKA KGCNNTDMSH ELLLASSSVC SFGASNDPNI SFRKHEDTDD  300
SIYFSDNDED PEDMVKQDRE GNRVKRSRNP EVHNLSEKKR REKINKKMRT LKELIPNCNK  360
VDKASMLDDA IDYLKTLKLQ LQIMSMSSGL WPLMMLPGAH HMNNGPHLPQ LVGGGMGFRP  420
PQLPIPPLSA ITDNRLQMFG FPSQIPSMPL PHPPFFPVIG NSATQPHLAN PLPKNLDPLE  480
NLSATKQVPN QRSFQHHITS TPLATPFVFP QN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1337342KKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10677
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311291e-117KT031129.1 Glycine max clone HN_CCL_180 bHLH transcription factor (Glyma19g40980.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212368.10.0transcription factor PIF3
TrEMBLA0A151TXB80.0A0A151TXB8_CAJCA; Transcription factor PIF3
STRINGXP_007163252.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133291829
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.25e-36phytochrome interacting factor 3