PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10775
Common NameKK1_011086
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 273aa    MW: 31793.8 Da    PI: 9.8543
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10775genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.71.8e-1711881699
                   EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
             B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                     lp +f++ ++g++++  + +l d + + W+++l  +k  gr v+++GW++F+k++gL+e Df+vF++dg+s+f  +vk+f++
  C.cajan_10775 11 KKLPTSFTKFFNGITPC--KTILVDHDRNFWDIYL--EKIEGRLVFKNGWQQFAKEKGLEEEDFLVFQYDGKSTF--NVKIFSR 88
                   579*****999999777..68999***********..*********************************98888..****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086313.197189IPR003340B3 DNA binding domain
SMARTSM010193.1E-8489IPR003340B3 DNA binding domain
SuperFamilySSF1019365.49E-201091IPR015300DNA-binding pseudobarrel domain
PfamPF023621.7E-151088IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.8E-181291IPR015300DNA-binding pseudobarrel domain
CDDcd100176.04E-151387No hitNo description
SuperFamilySSF1019364.12E-13161250IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.3E-10163251IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.319164262IPR003340B3 DNA binding domain
SMARTSM010190.16165265IPR003340B3 DNA binding domain
CDDcd100174.49E-7175247No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MSNNSIILKE KKLPTSFTKF FNGITPCKTI LVDHDRNFWD IYLEKIEGRL VFKNGWQQFA  60
KEKGLEEEDF LVFQYDGKST FNVKIFSRTG CRKVAAPSSC EKIVPSVILN KDSDLRSNKI  120
QRGCKRKHSS PSLKTNEKLV VAEENDNHHE KKPCLTKCVP LQNPHFQIYF DAAWRLKKVE  180
LPRRVLRKMN IKLMPNRIIN LRDENDTLWP VIITAGFGDR YFLGSGWSVF QRSNNIQEGQ  240
QCDFQFVVDK ANVVQEMLVR VHSKCTMSWV DCK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10775
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210978.10.0putative B3 domain-containing protein At5g66980
TrEMBLA0A151TXL10.0A0A151TXL1_CAJCA; Putative B3 domain-containing protein At5g66980 family
STRINGGLYMA03G40651.11e-121(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF143221518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-19B3 family protein