PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10780
Common NameKK1_011092
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 488aa    MW: 56010.7 Da    PI: 6.974
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10780genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.54.5e-1588150269
       trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                    Wt++evlaL ++r+ me+++ +       W++vs+k++e gf++s+++Ckek+e+ ++++ +i+ g++
  C.cajan_10780  88 WTNDEVLALFRIRSTMENWFPDL-----TWDHVSRKLAELGFKKSAEKCKEKFEDESRYFDNINLGKN 150
                    ********************987.....9*******************************99987666 PP
2trihelix95.35.8e-30351437185
       trihelix   1 rWtkqevlaLiearremeerlrrgk...lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                    rW+++evlaLi++r    +++++++    k+plWe++s+ m e g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql
  C.cajan_10780 351 RWPRDEVLALINLRCTSVSNSNNEEkegNKGPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SLNSRTCPYFHQL 437
                    8*************8666666643324499*******************************************8.89999*******9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007171684141IPR001005SANT/Myb domain
PfamPF138371.1E-986148No hitNo description
PROSITE profilePS500905.80887139IPR017877Myb-like domain
SMARTSM007170.92348413IPR001005SANT/Myb domain
CDDcd122031.68E-23350418No hitNo description
PfamPF138374.2E-20350437No hitNo description
PROSITE profilePS500906.307351411IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MFDGETDQFH QFIAPRTTLP LNLSFPLHSS STPNTFLPFD LYNPHFPLQT NLLHHPSPSP  60
SPSPSPSHKH KQPNVNVQTQ LPDLTDSWTN DEVLALFRIR STMENWFPDL TWDHVSRKLA  120
ELGFKKSAEK CKEKFEDESR YFDNINLGKN NYRFLSELEE LCQNSDPGGC GGDSHHHALK  180
ENSRDIETKQ CDDEVVVEKS KERKRKRRDR FEMFKGFCES VVNKMMAQQE EIHNKLLHDM  240
MKRDQEKFAR EEAWKKKEME RMNKELEIMA QEQAIAGDRH ATIIEFLKNT NDTLVLQVPS  300
SSNSSPAPHN NPSSSSLNSH NSIIPLESNS VSTYKSTLAT SESWKEDVGR RWPRDEVLAL  360
INLRCTSVSN SNNEEKEGNK GPLWERISQG MLELGYKRSA KRCKEKWENI NKYFRKTKDV  420
NKKRSLNSRT CPYFHQLSCL YGIGQGKIVP QSEREGFDSN PTANSCEVPP EADESPQVGS  480
AGLVQYAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202207RKRKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10780
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150384e-77AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020211995.10.0trihelix transcription factor GTL2
TrEMBLA0A151TXS80.0A0A151TXS8_CAJCA; Uncharacterized protein
STRINGGLYMA19G43280.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50433355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.12e-66Trihelix family protein