PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10870
Common NameKK1_011188
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 297aa    MW: 33870.5 Da    PI: 4.7441
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10870genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-2096145255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +++GVr+++ +grW+AeIrdp++   r+r++lg+++t+eeAa  +++a+ +++g
  C.cajan_10870  96 KFRGVRQRP-WGRWAAEIRDPVK---RTRVWLGTYDTPEEAAMVYDKAAINFRG 145
                    89*******.**********755...5***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.3E-3095153IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-2196152IPR016177DNA-binding domain
PfamPF008472.2E-1396145IPR001471AP2/ERF domain
SMARTSM003803.0E-3796159IPR001471AP2/ERF domain
CDDcd000183.75E-3396152No hitNo description
PROSITE profilePS5103223.30196153IPR001471AP2/ERF domain
PRINTSPR003674.7E-1097108IPR001471AP2/ERF domain
PRINTSPR003674.7E-10119135IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MESKLSEQKV VTYKHVKPSI VKALPKVVRI SVTDPYATDD EDEDEDEGLV RIKKFVNEIR  60
MVDNHCSTNT ESPVHVKHHH KERVITAKTE KGNGRKFRGV RQRPWGRWAA EIRDPVKRTR  120
VWLGTYDTPE EAAMVYDKAA INFRGSNALT NFIKPPTSEE NINTDVVFDY GLNESEDSVS  180
GLVENENVSS GNDSSKESHL PSPTSVLGFR HFMLEEISET DGVIREDPSL LDSFLFSDSS  240
SIDSYFNFET PPPVFLHETS ATEPVFHDNF SDISHLVSKD FQFCNWDIDS YFNDLFQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2294152362ATERF1
3gcc_A1e-2294152362ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10870
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150383e-52AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029127030.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A151TY160.0A0A151TY16_CAJCA; Ethylene-responsive transcription factor CRF5
STRINGGLYMA03G41640.11e-115(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.24e-37cytokinin response factor 2