PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10909
Common NameKK1_011229
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 171aa    MW: 19195.8 Da    PI: 7.2512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10909genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-182171155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+ +l+g
  C.cajan_10909 21 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAARAYDVAAFCLKG 71
                   68*****887.**********843...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-122171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.1E-322280IPR001471AP2/ERF domain
PROSITE profilePS5103223.8682279IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-222281IPR016177DNA-binding domain
SMARTSM003802.0E-372285IPR001471AP2/ERF domain
CDDcd000184.21E-322380No hitNo description
PRINTSPR003677.0E-132334IPR001471AP2/ERF domain
PRINTSPR003677.0E-136181IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MDHQPPPCPQ DDTTRASTRH PVYRGVRKRR WGKWVSEIRE PRKKSRIWLG SFPVPEMAAR  60
AYDVAAFCLK GRKAQLNFPD EVESLPLPPT RTPRDIQAAA AKAARTIKAS RDEKGGIASD  120
DDFWGQIELP ELMDGELECC WISPGGSSWT SSGDFSAWPE LELLPPFMAC L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1720811274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10909
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-77AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213609.11e-123ethylene-responsive transcription factor ERF023
SwissprotQ1ECI22e-57ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A151TXZ61e-122A0A151TXZ6_CAJCA; Ethylene-responsive transcription factor ERF023 family
STRINGXP_007147322.12e-79(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF63752847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.19e-59ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]