PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10919
Common NameKK1_011239
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 277aa    MW: 31508.6 Da    PI: 9.3125
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10919genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.6e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed ll ++++ +G g+W++ +++ g+ R++k+c++rw +yl
    C.cajan_10919 14 RGPWTPREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding54.13.6e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eEd+l+++ + +lG++ W++Ia +++ gRt++++k++w+++l
    C.cajan_10919  67 RGNITPEEDDLIIRMHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112
                      7999******************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.793961IPR017930Myb domain
SuperFamilySSF466893.26E-3011108IPR009057Homeodomain-like
SMARTSM007176.5E-131363IPR001005SANT/Myb domain
PfamPF002491.1E-141461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.5E-241568IPR009057Homeodomain-like
CDDcd001674.16E-101661No hitNo description
PROSITE profilePS5129427.35762116IPR017930Myb domain
SMARTSM007177.9E-1766114IPR001005SANT/Myb domain
PfamPF002491.6E-1567112IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.2E-2769116IPR009057Homeodomain-like
CDDcd001671.08E-1271112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MGRAPCCSKV GLHRGPWTPR EDALLTKYIQ AHGEGQWRSL PKRAGLLRCG KSCRLRWMNY  60
LRPDIKRGNI TPEEDDLIIR MHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKKLRNEG  120
TDPKTGDKLT EKKKGKKKNK QKNKENNNNN NKGSEKTLVY LPKPIRVKAL SCIPRSDSTF  180
TLDSNSASTS QEKVQSPEAK EVNMVWEVGN DGDNVGNIVF FGQDHDLVNS ASYVESHSDH  240
VHTDHGTLEK LYEEYLQLLN VEDKPDELDS FAQSLLM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-26121165108B-MYB
1h8a_C4e-261211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10919
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212715.10.0myb-related protein 308
TrEMBLA0A151TY060.0A0A151TY06_CAJCA; Transcription repressor MYB4
STRINGXP_007147330.11e-161(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.15e-67myb domain protein 4