PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10967
Common NameKK1_011291
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 328aa    MW: 37984.6 Da    PI: 7.2269
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10967genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12151202155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ +  L++l+P +   + ++ + a+i   A++++k+L+
  C.cajan_10967 151 QRMTHIAVERNRRRQMNDHLCVLKSLMPLS---YIQRGDHASIIGGAIDFVKELE 202
                    79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.31E-12149206No hitNo description
SuperFamilySSF474599.68E-16150218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.723150201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-10151202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-12151214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-8156207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MKWCDLQFFG EDLEVNCLVG EESLKLEEDE QSLVSSLEDN MPFLQMLQSA ESSQFIPFKE  60
PGFETLMRLK KPREGMRLVE VESCVTHDVV EAQSSNELQH VHSAWGVEKV SNECNKGEDR  120
NKDAKTEVAA RERRKRRRTR QRKNKEEVEK QRMTHIAVER NRRRQMNDHL CVLKSLMPLS  180
YIQRGDHASI IGGAIDFVKE LEQLLQSLEA QKRVRKNEEV GSTTGMFEEQ VKCGDEFKAE  240
KKSESVAVEV TVIQAHVNLK IQCLRRHGQL IKAIVAFEDL KLTILHLNIT SSEATVLYSF  300
NLKQMLKWNQ VSVLFFFFFF LTCNLSKT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133137RKRRR
2133138RKRRRT
3136142RRTRQRK
4151162RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10967
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213226.10.0transcription factor bHLH67 isoform X1
SwissprotO810375e-66BH070_ARATH; Transcription factor bHLH70
TrEMBLA0A151TYF00.0A0A151TYF0_CAJCA; Transcription factor bHLH70
STRINGXP_007135328.11e-117(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.16e-58bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]