PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_11379
Common NameKK1_011708
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 182aa    MW: 20836.9 Da    PI: 6.4322
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_11379genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000143355123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y+C+ C++ F++   L  H++ H
  C.cajan_11379 33 YECTFCKRGFTNAQALGGHMNIH 55
                   99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.1E-53059IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576675.98E-73059No hitNo description
PROSITE profilePS5015711.4683360IPR007087Zinc finger, C2H2
SMARTSM003550.00973355IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803555IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051973Biological Processpositive regulation of telomerase activity
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MNSEKPVSPE NLSEENDHQE EAHDDSGGTK RSYECTFCKR GFTNAQALGG HMNIHRKDRA  60
KAKQFTPEAS SPIINKFNND ESMALPFVSE ILSQPTRPNY SILESQRNCD VHFHPPPPAH  120
AFYYEFYNPR SRPSSLNQEL RDANLSLQIG PSHHVDDIHQ VRRGNQKDKE VDLELRLGHD  180
PY
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_11379
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-154AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218114.11e-135transcriptional regulator TAC1
TrEMBLA0A151TEJ91e-134A0A151TEJ9_CAJCA; Putative transcriptional regulator RABBIT EARS
STRINGXP_007144064.11e-103(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16863073
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-16C2H2 family protein