PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12242
Common NameKK1_012616
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 195aa    MW: 21804.6 Da    PI: 11.2569
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12242genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.42e-113480354
                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   ++h+e+E+rRR riN  +e+Lr +lP++      K +Ka++L ++++ +k+L
  C.cajan_12242 34 KKHSEAEKRRRTRINGQYETLRNILPNL-----IKRDKASVLAETIKQVKEL 80
                   68*************************9.....69***********999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.7543180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.45E-93484No hitNo description
PfamPF000105.9E-93480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.0E-143592IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.27E-133593IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-93786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.91E-4122172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MIRGSFPHPF ISRTYKTSFL KPRSKAEIKL LAAKKHSEAE KRRRTRINGQ YETLRNILPN  60
LIKRDKASVL AETIKQVKEL KKKVTKLEED NSANPSKDVK FPSGADKLNL GKCNNEGLVK  120
ATLSCEDSPR LMSSISRALG SVKTRVVKAE IVSVGGRTRS VLWVQGIGND GLGMLKSTLK  180
VAMHKPAFKM RRFTQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_12242
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020216006.11e-141transcription factor bHLH131
SwissprotP0CB251e-41BH131_ARATH; Transcription factor bHLH131
TrEMBLA0A151TH021e-140A0A151TH02_CAJCA; Transcription factor bHLH131 family
STRINGGLYMA01G02930.21e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.15e-32bHLH family protein