PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12481
Common NameKK1_012861
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 131aa    MW: 14550.8 Da    PI: 9.4178
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12481genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.8e-054969323
                   ETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                   Cp C+k F+++     H+r H
  C.cajan_12481 49 CPVCNKEFTSWKAAFGHMRAH 69
                   *******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048235Biological Processpollen sperm cell differentiation
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MKTPWQVLEE LCGGSSTPVA VAPVSEGVLQ PKKRKTSEVR DPPRGKPICP VCNKEFTSWK  60
AAFGHMRAHP NRDYRGFYKP PAFPSSSSSK DQPPPSANNN KGKANYLINK QCLCHMCMHV  120
CAFDNFILCV N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13036PKKRKTS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_12481
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020216085.11e-70zinc finger protein ZAT2
TrEMBLA0A151THM22e-93A0A151THM2_CAJCA; Uncharacterized protein
STRINGGLYMA11G09030.16e-28(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102022128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.11e-14C2H2 family protein