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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | C.cajan_12540 | ||||||||
| Common Name | KK1_012923 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family | bZIP | ||||||||
| Protein Properties | Length: 137aa MW: 15575.7 Da PI: 10.2335 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 25.4 | 3.1e-08 | 80 | 102 | 4 | 26 |
XCHHHCHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKka 26
++r r++kNRe+A rsR+RK++
C.cajan_12540 80 DRRNNRMIKNRESAARSRARKQE 102
7899******************8 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.20.5.170 | 8.3E-7 | 79 | 103 | No hit | No description |
| SuperFamily | SSF57959 | 1.69E-6 | 81 | 116 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 85 | 99 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 137 aa Download sequence Send to blast |
MEEVWKDINL ATLNEQGSRP TTTHPTLMFQ DFLARPLIDP PNTNTILSSA PSQLQTPPLV 60 TALSLSSRPH FHPPQCTLAD RRNNRMIKNR ESAARSRARK QEFLASFSFH LTFLPTSSQL 120 HSQHTQKYYS SLLTTCI |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | C.cajan_12540 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_029127583.1 | 4e-71 | bZIP transcription factor 27 | ||||
| TrEMBL | A0A151THW9 | 4e-95 | A0A151THW9_CAJCA; Uncharacterized protein | ||||
| STRING | GLYMA01G36810.1 | 2e-28 | (Glycine max) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF3755 | 32 | 52 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G17770.2 | 5e-15 | basic region/leucine zipper motif 27 | ||||




