PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12808
Common NameKK1_013200
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family DBB
Protein Properties Length: 195aa    MW: 21473.5 Da    PI: 7.6498
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12808genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.62.2e-07433534
       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                    C+ +e+  ++ fC  ++  lC+ C ++ H
  C.cajan_12808  4 LCDACESAAAIVFCAADEAALCRACDEKVH 33
                   7**************************998 PP
2zf-B_box315.1e-105291237
       zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
                   + ++C+ +e+ ++ ++Ce++++ lC +C +  H g    H
  C.cajan_12808 52 DVPRCDICENAPAFFYCETDGSSLCLQCDMLVHVGgkrtH 91
                   5799**************************9996544455 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003364.4E-8147IPR000315B-box-type zinc finger
PROSITE profilePS5011910.239147IPR000315B-box-type zinc finger
PfamPF006438.1E-6342IPR000315B-box-type zinc finger
CDDcd000212.95E-6345No hitNo description
SuperFamilySSF578451.12E-54886No hitNo description
PROSITE profilePS501199.1435196IPR000315B-box-type zinc finger
SMARTSM003362.9E-125196IPR000315B-box-type zinc finger
PfamPF006434.2E-85291IPR000315B-box-type zinc finger
CDDcd000219.90E-85484No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MRTLCDACES AAAIVFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLASP SDVPRCDICE  60
NAPAFFYCET DGSSLCLQCD MLVHVGGKRT HGRYLLFRQR VEFPGDKSSH GENPGSQPLE  120
PGEAKRGQNP LPKLKMGEKQ QNHRMPMVPT PGPDADGHTK METKMIDLNM KPNRIHEQAS  180
NNQVRVHGSN FCLPS
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_12808
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0954480.0BT095448.1 Soybean clone JCVI-FLGm-19K10 unknown mRNA.
GenBankBT0987720.0BT098772.1 Soybean clone JCVI-FLGm-12P20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218073.11e-135B-box zinc finger protein 18
SwissprotC0SVM58e-73BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A151TIN91e-143A0A151TIN9_CAJCA; Putative salt tolerance-like protein At1g78600 family
STRINGGLYMA01G37370.11e-131(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27343370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.13e-75DBB family protein