PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13374
Common NameKK1_013786
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family LBD
Protein Properties Length: 195aa    MW: 22879.4 Da    PI: 4.4766
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13374genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26037.47.3e-1214358100
         DUF260  58 msslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                    ms+++y++++rardPv G++++i++lq+q+e ++ael+l+ ++
  C.cajan_13374   1 MSTIMYQSDMRARDPVGGCYKLIQHLQSQIEYANAELHLVLQH 43 
                    89***********************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508919.032144IPR004883Lateral organ boundaries, LOB
PfamPF031952.3E-8140IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MSTIMYQSDM RARDPVGGCY KLIQHLQSQI EYANAELHLV LQHLAFFRAQ AHQNNDISNV  60
TSSQPFLQQM SQEQHQQYQQ QQQQFEQQQQ QQQFEQQQYV NYNPSLQEDI NLWAVQNSIS  120
LLPLSLEDDI NQDPVVDYDY DQKPVLELMN KIESDATVHP HHRFVCIKVH VLCFLNECDL  180
DCVFCFHTTA GSEFN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13374
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029128889.11e-112LOB domain-containing protein 22-like isoform X2
TrEMBLA0A151SU691e-140A0A151SU69_CAJCA; LOB domain-containing protein 22
STRINGGLYMA13G42570.17e-33(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.11e-16LOB domain-containing protein 22