PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_13414

Common Name

KK1_013826

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Nin-like

Protein Properties

Length: 918aa MW: 101368 Da PI: 6.1609

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_13414	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	7.7e-29	600	650	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ C.cajan_13414 600 EKNVSLSVLQQYFSGSLKDAAKHIGVCPTTLKRICRQHGISRWPSRKINKV 650 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.813	584	670	IPR003035	RWP-RK domain
Pfam	PF02042	5.8E-26	602	650	IPR003035	RWP-RK domain
SuperFamily	SSF54277	4.21E-22	813	902	No hit	No description
Gene3D	G3DSA:3.10.20.240	2.2E-22	816	897	No hit	No description
SMART	SM00666	3.2E-22	818	900	IPR000270	PB1 domain
PROSITE profile	PS51745	20.408	818	900	IPR000270	PB1 domain
CDD	cd06407	3.67E-33	819	899	No hit	No description
Pfam	PF00564	4.5E-17	821	899	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 918 aa Download sequence Send to blast
MEYPFSPKGG GIGDWQSSRA QLEGSTSLDG GMRNSISEDM PNSFSELMNF DTYAGLCDSP 60 SITDQILANE LPSFASLPYP LPDGFNLVQQ NSGQCYMSRV GKNNNDMESS PMYGEKVGCQ 120 QMDTLLGFFS NSNDGNNLNS KLKTNGSSQH SNAFDTGNYI MSRPPGLSLD ERMLRALSFF 180 KESAGGGILA QVWVPIKHGD QFILSTSEQP YLLDQMLAGY REVSRTFTFS AEGKSGCFLG 240 LPGRVFTSKV PEWTSDVGYY SMSEYLRFEH AINHKVRGSI AFPIFDMHSE LPCCAVLELV 300 TTKEKADFDK ELEIVCRALQ LVNLRTTKPL RLLPECLSNN KKATLTEIVD VLRSVCHAHR 360 LPLALTWIPC YTEGSRGEAT RIQIKEGHST SSEKGILCIE ESACYITDRA MTGFVRACME 420 HHLEEGKGVA GKALQSNHPF FYPDVKTYDI SEYPLVHHAR KYNLNAAVAI RLRSTYTNDD 480 DYILEFFLPA NMRGSSEQQL LLDNLSGTMQ RICRSLRTVS DVELSGIGSS QVGFGKKNVP 540 SFFPLSSRNS QIPLINGDRD SSQKMSLKAT NLGNNEIEPS PSQERNGSKR QVQKNRSTLE 600 KNVSLSVLQQ YFSGSLKDAA KHIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV 660 LNSVQGVEGG LKFDPSVGAF VAGGSIIQEI DAHKSLMFPE KNTIKDCAPD TLEAVSVPTA 720 PCSEDENFSI KQQAFAPRCK IVLNKLVWVS RYLIGDEMDI GVDGDDGVVE PNHPTSSSLT 780 DSSNGSGSMM HSNSSGSESF QNQNQSKVKS TIVDSGSILI VKATYGEDTI RFKFDPSAGC 840 FRLYEEVATR FKLQNGSFQL KYLDDEEEWV MLVNDADLQE CIEILDDIGT RSVRFLVRDM 900 PCVLGSSGSS NGYLGGSL

Sequence ? help Back to Top

Protein Sequence Length: 918 aa Download sequence Send to blast

MEYPFSPKGG GIGDWQSSRA QLEGSTSLDG GMRNSISEDM PNSFSELMNF DTYAGLCDSP  60
SITDQILANE LPSFASLPYP LPDGFNLVQQ NSGQCYMSRV GKNNNDMESS PMYGEKVGCQ  120
QMDTLLGFFS NSNDGNNLNS KLKTNGSSQH SNAFDTGNYI MSRPPGLSLD ERMLRALSFF  180
KESAGGGILA QVWVPIKHGD QFILSTSEQP YLLDQMLAGY REVSRTFTFS AEGKSGCFLG  240
LPGRVFTSKV PEWTSDVGYY SMSEYLRFEH AINHKVRGSI AFPIFDMHSE LPCCAVLELV  300
TTKEKADFDK ELEIVCRALQ LVNLRTTKPL RLLPECLSNN KKATLTEIVD VLRSVCHAHR  360
LPLALTWIPC YTEGSRGEAT RIQIKEGHST SSEKGILCIE ESACYITDRA MTGFVRACME  420
HHLEEGKGVA GKALQSNHPF FYPDVKTYDI SEYPLVHHAR KYNLNAAVAI RLRSTYTNDD  480
DYILEFFLPA NMRGSSEQQL LLDNLSGTMQ RICRSLRTVS DVELSGIGSS QVGFGKKNVP  540
SFFPLSSRNS QIPLINGDRD SSQKMSLKAT NLGNNEIEPS PSQERNGSKR QVQKNRSTLE  600
KNVSLSVLQQ YFSGSLKDAA KHIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV  660
LNSVQGVEGG LKFDPSVGAF VAGGSIIQEI DAHKSLMFPE KNTIKDCAPD TLEAVSVPTA  720
PCSEDENFSI KQQAFAPRCK IVLNKLVWVS RYLIGDEMDI GVDGDDGVVE PNHPTSSSLT  780
DSSNGSGSMM HSNSSGSESF QNQNQSKVKS TIVDSGSILI VKATYGEDTI RFKFDPSAGC  840
FRLYEEVATR FKLQNGSFQL KYLDDEEEWV MLVNDADLQE CIEILDDIGT RSVRFLVRDM  900
PCVLGSSGSS NGYLGGSL

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_13414

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020223286.1	0.0	protein NLP8
Swissprot	O22864	0.0	NLP8_ARATH; Protein NLP8
TrEMBL	A0A151SUG4	0.0	A0A151SUG4_CAJCA; Uncharacterized protein
STRING	GLYMA13G42160.2	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3464	34	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.2	0.0	Nin-like family protein

Publications ? help Back to Top
Yan D, et al. NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis. Nat Commun, 2016. 7: p. 13179 [PMID:27731416]