PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13674
Common NameKK1_014093
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 271aa    MW: 29967.3 Da    PI: 4.6494
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13674genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-1984134256
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                    +++GVr+++ +g+W+AeIrdps    r  r +lg+++taeeAa  +++a+ +l+g+
  C.cajan_13674  84 KFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAAIVYDNAAIQLRGA 134
                    89*******.**********84....34*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-2983140IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-2184140IPR016177DNA-binding domain
PROSITE profilePS5103223.18284141IPR001471AP2/ERF domain
PfamPF008472.0E-1284133IPR001471AP2/ERF domain
SMARTSM003801.1E-3684147IPR001471AP2/ERF domain
CDDcd000184.24E-3184140No hitNo description
PRINTSPR003674.0E-108596IPR001471AP2/ERF domain
PRINTSPR003674.0E-10107123IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MEEQQNPFKN HPYPKLVRVR VADADATDSS SDDDDQPSAS STRRRVKCFV NEITVHGGVN  60
VVSKKRRFKS GGAPASRRRA AGRKFRGVRQ RPWGKWAAEI RDPSRRVRLW LGTYDTAEEA  120
AIVYDNAAIQ LRGADALTNF ITPPAEKNKS GWCSGEELRS PTSVLGCCSE GESVTATMTA  180
NDVAEPASEC EYSCVSGDKY LKSESVFPIP SDVVFEFEST LDMFNVAESS IFLGDDLSEG  240
FVSENLDLGF RECDNFQDIG DLFVWDPLLA L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2080140162ATERF1
3gcc_A1e-2080140162ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16368KKRRFK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13674
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020224628.10.0ethylene-responsive transcription factor CRF1
TrEMBLA0A151SV510.0A0A151SV51_CAJCA; Ethylene-responsive transcription factor CRF1
STRINGXP_007160137.11e-131(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.23e-40cytokinin response factor 2