PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13759
Common NameKK1_014181
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 196aa    MW: 21944.7 Da    PI: 9.8393
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13759genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.81.6e-1091135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+++++ + ++lG+g+ +  +r + ++Rt  q+  + qky
    C.cajan_13759  91 SWTEEEHQIFLAGLEKLGKGNLRGMSRSFVTTRTSTQVDRHAQKY 135
                      7*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501588.614522IPR001878Zinc finger, CCHC-type
PROSITE profilePS5129412.42684140IPR017930Myb domain
SuperFamilySSF466891.64E-1386141IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-1387139IPR006447Myb domain, plants
SMARTSM007172.6E-688138IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.7E-888132IPR009057Homeodomain-like
CDDcd001673.96E-691136No hitNo description
PfamPF002491.6E-791135IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MGIARKCSYC GNLGHNARTC KSLSHRQLKL FGVQLDVYSS SSLPSYSATQ TSFSTNYLFS  60
SPVSSSFSSP SLPPANDNSD SYFLDTKKGV SWTEEEHQIF LAGLEKLGKG NLRGMSRSFV  120
TTRTSTQVDR HAQKYFLRQS NNTLNRTKHR STLFHGLSHP HSVLNWPITS NDCTFQSVFL  180
DLELKLATPK PLELPF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13759
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029128613.11e-119transcription factor MYBS3
TrEMBLA0A151SVC41e-142A0A151SVC4_CAJCA; Myb-like protein J
STRINGGLYMA06G05450.27e-70(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF151421013
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-35MYB_related family protein