PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13804
Common NameKK1_014227
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 186aa    MW: 20861.4 Da    PI: 10.3673
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13804genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.41.3e-212372255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr ++ +gr++AeIrdp   +k++r++lg+f+taeeAa+a++aa+++++g
  C.cajan_13804 23 HYRGVRKRP-WGRYAAEIRDP---NKKTRVWLGTFDTAEEAARAYDAAARQFRG 72
                   69*******.**********9...347************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.8E-342381IPR001471AP2/ERF domain
CDDcd000183.10E-202380No hitNo description
PfamPF008471.7E-152372IPR001471AP2/ERF domain
PROSITE profilePS5103224.3812380IPR001471AP2/ERF domain
SMARTSM003807.6E-402386IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-232381IPR016177DNA-binding domain
PRINTSPR003677.8E-122435IPR001471AP2/ERF domain
PRINTSPR003677.8E-124662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MVKDPNANAK AKTKKPHNGH DLHYRGVRKR PWGRYAAEIR DPNKKTRVWL GTFDTAEEAA  60
RAYDAAARQF RGPKAKTNFP NTTATNENTT NNNSPSQSST VESSTPEREP TRRPNNRFPF  120
LHQLLVSPVS PMGPVQPVFF LDRPGLFPVR FEPVPVQSDS DSSSVVDCQP KRELNLDLNL  180
APPMDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-2224811573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00623PBMTransfer from PK19363.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13804
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020224324.11e-135ethylene-responsive transcription factor 9
SwissprotQ9FE671e-48ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLA0A151SVH91e-134A0A151SVH9_CAJCA; Ethylene-responsive transcription factor 9
STRINGGLYMA12G13315.16e-58(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-21erf domain protein 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]
  3. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]