PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_14321
Common NameKK1_014749
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 229aa    MW: 26346.2 Da    PI: 9.8283
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_14321genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.51.2e-1880134256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    rk+ ++tkeq  +Le+ F+ + +++ ++++ LA++l+L+ rqV vWFqNrRa+ k
  C.cajan_14321  80 RKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTK 134
                    78899************************************************98 PP
2HD-ZIP_I/II1117.8e-3680169190
    HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                    +kk++l+keq+++LE+ F+ +++L+p +K++la++L+l+ rqv+vWFqnrRARtk+kq+E+d e+Lk++y++l++en rL++e +eLr++
  C.cajan_14321  80 RKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDREFLKKCYEKLTNENLRLKRELQELRAQ 169
                    69*************************************************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.31E-1869137IPR009057Homeodomain-like
PROSITE profilePS5007117.08676136IPR001356Homeobox domain
SMARTSM003892.1E-1478140IPR001356Homeobox domain
PfamPF000465.3E-1680134IPR001356Homeobox domain
CDDcd000865.26E-1480137No hitNo description
Gene3DG3DSA:1.10.10.601.4E-1780134IPR009057Homeodomain-like
PROSITE patternPS000270111134IPR017970Homeobox, conserved site
SMARTSM003405.4E-16136179IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEDDETCITN LSLGLGMRGH VPKKENQRVP CLNLTFHLSP KGEEAIHMVD QQQRDDHHDK  60
AKGFCLKHPN EISPDDSNNR KKLKLTKEQS ATLEDIFKLH TTLNPAQKQA LAEQLNLKHR  120
QVEVWFQNRR ARTKLKQTEV DREFLKKCYE KLTNENLRLK RELQELRAQN IGATPMYIQL  180
SKAKTLSICS SCGELLKPSE ENKATISKVI RNSKHKLQTK VGLEGIMNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128136RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_14321
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311721e-117KT031172.1 Glycine max clone HN_CCL_117 homeodomain/HOMEOBOX transcription factor (Glyma15g18320.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020224186.11e-170homeobox-leucine zipper protein HAT22
SwissprotA2XE769e-45HOX19_ORYSI; Homeobox-leucine zipper protein HOX19
SwissprotQ8GRL49e-45HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19
TrEMBLA0A151SWZ11e-168A0A151SWZ1_CAJCA; Homeobox-leucine zipper protein HOX19
STRINGGLYMA09G07051.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56642851
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.15e-47HD-ZIP family protein