PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15094
Common NameKK1_015532
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 246aa    MW: 27649.3 Da    PI: 9.7704
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15094genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.1e-0585107123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C+ C+k F+++  L  H++ H
  C.cajan_15094  85 FSCKFCDKKFPTSQALGGHQNAH 107
                    89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.602.4E-573111IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.0E-682112No hitNo description
PfamPF139121.6E-585109IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.13685112IPR007087Zinc finger, C2H2
PROSITE patternPS00028087107IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MSEELLVGGV ESRKLKRKIE ETSSNDVVDS ELVLSLSLGN NKKVNESSSK IFSKPLKNCK  60
DSPSFSQKVM ENTNHQVVFP KQRQFSCKFC DKKFPTSQAL GGHQNAHRRE RVLSRMDKEI  120
EMGTFGPGAQ MFPYSSMPHP HPFRGPIPFY YGANLHPMAH MSTMPWPHFV PSYGNQGLNN  180
TSIIEQRFGM TNTWGVTAEN PQNIYRRDVG FGDDHNQVPS LDVAGRATMA RSALNGLLGN  240
QYTRNI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15094
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020224284.10.0zinc finger protein 8
TrEMBLA0A151SZ650.0A0A151SZ65_CAJCA; Zinc finger protein 3
STRINGGLYMA02G22110.11e-128(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF142291217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.13e-13C2H2 family protein